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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818100.1_cds_XP_016499464.1_13386
CDS Infomation

[gene=LOC107818057] [db_xref=GeneID:107818057] [protein=serine/threonine-protein kinase AFC2-like isoform X1] [protein_id=XP_016499464.1] [location=join(2255..2356,3367..3553,4222..4248,4333..4486,4580..4628,4724..4838,5041..5132,5260..5416,5509..5573,5682..5779,5854..5956,6039..6188)] [gbkey=CDS]
Sequence

ATGGAAATGGAATACGTAACGGAGTATCCACATCCATACATGGATCGTCGTCCTAAGAAG
CGTCCGAGATTAGATTGGGATCCTTCCCATACTCCCAACAAGGCTCAGTCAGGAATATAT
TATGGGCAAGAGGTTGGCAATTCATCGAGCTATGTGCATTCAAGGTTACTACCCGATCAT
GATAGTTTATATGTAAAAGGACTGGCTCAAAAAGGCTCTCCCCCACAGCGAGATGATGAC
AAAGATGGACATTACATGTTTGAGCTTGGAGAGAATTTAACTACTCGCTATAAAATTCTC
AAAAAGATTGGTGAAGGTACCTTTGGGCAAGTTCTAGAATGCTGGGACAGAGAGCAGAAG
GGATTTGTTGCCATCAAAATTATCCGAAGTATCAAGAAGTATCGTGAAGCGGCAATGGTA
GAAGTTGACGTGCTTCAGTTGCTAGGGAGATATGATAGGGGTGGAAGCCGTTGTGTCCAA
TTACGGAACTGGTTTGATTATCGTAACCATATTTGTTTAGTGTTTGAGAAGCTTGGGCCA
AGCTTATTCGATTTTCTACGGAAAAACAGTTATCGCGCATTTCCGGTTGATCTAGTTCGT
GAAATTGGAAGGCAATTGTTGGAATGTGTAGCATTCATGCATGATATGCGTCTCATCCAT
ACGGATCTTAAGCCCGAGAATATACTCTTTGTTTCTGCAGACTACATAAAAGTGCCTGAC
TACAAGGGTACACCATGGTCACACAGAGACAGATCATTTTCTAAAAGGTTACCAAAGTCA
AGTGCTATCAAAGTAATTGATTTTGGTAGTACTGCTTACGAACGACCAGATCACAACTAT
ATTGTGTCCACACGACATTACCGTGCACCTGAAGTTATTCTTGGCCTTGGATGGAGCTAC
CCGTGTGATTTATGGAGTGTGGGCTGCATCTTGGTAGAACTATGCTCGGGTGAAGCTTTA
TTCCAGACACACGAGAATTTGGAGCACCTGGCAATGATGGAAAGAGTATTGGGTCCACTA
CCATCACAAATGTTAAAAAGAGTGGATCGGCATGCGGAGAAATATGTAAGGAGAGGTAGA
TTAGACTGGCCTGAAGGTGCCACTTCCAGAGAGAGCATAAAGTCCGTGATGAAGCTGCCT
CGTCTTCAGAATTTGGTGATGCAGCATGTTGATCATTCAGCTGGAGATCTTATAGACCTG
TTGCAAGGTCTCCTTAGATTTGATCCATCTATCAGGATGACGGCTCATGATGCGCTACGG
CATCCCTTTTTCACCAGGGACCAATATCGGAGGATATAG

Peptide Sequence

PEP ID

XP_016499464.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase AFC2-like isoform X1 [Nicotiana tabacum]
Sequence

MEMEYVTEYPHPYMDRRPKKRPRLDWDPSHTPNKAQSGIYYGQEVGNSSSYVHSRLLPDH
DSLYVKGLAQKGSPPQRDDDKDGHYMFELGENLTTRYKILKKIGEGTFGQVLECWDREQK
GFVAIKIIRSIKKYREAAMVEVDVLQLLGRYDRGGSRCVQLRNWFDYRNHICLVFEKLGP
SLFDFLRKNSYRAFPVDLVREIGRQLLECVAFMHDMRLIHTDLKPENILFVSADYIKVPD
YKGTPWSHRDRSFSKRLPKSSAIKVIDFGSTAYERPDHNYIVSTRHYRAPEVILGLGWSY
PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPSQMLKRVDRHAEKYVRRGR
LDWPEGATSRESIKSVMKLPRLQNLVMQHVDHSAGDLIDLLQGLLRFDPSIRMTAHDALR
HPFFTRDQYRRI

Transcript Sequence

Gene sequence data has not been registered.